Rumex acetosa

Tandemly repeated sequences

There are 2 pages with 20 entries

Name Description Protein homology Other info Source
RAY-1.5 R. acetosa Y-chromosome enriched 1.5 kb long sequence. RAPD-isolated male-specific sequence. https://www.researchgate.net/publication/286981393_Identification_of_a_long_Y-chromosome_enriched_repetitive_sequence_in_Rumex_acetosa_L
RAYS I CL30 - was localized in four loci on each arm of the Y1 chromosome and in two large loci at the p arm and two minor loci on the q arm of the Y2 chromosome. https://doi.org/10.1007/s004120050377
RAYS I https://doi.org/10.1093/gbe/evt049
RAYS I https://link.springer.com/article/10.1023/A:1009252913344
RAYS I R. acetosa and R. intermedius have two subfamilies (the RAYSI-S and RAYSI-J subfamilies and the INT-A and INT-B subfamilies, respectively), https://doi.org/10.1016/j.gene.2005.10.013
RAYS II CL221 - was present on the Y1 chromosome but was absent on the Y2 chromosome. https://doi.org/10.1093/gbe/evt049
RAYS II CL221 - was present on the Y1 chromosome but was absent on the Y2 chromosome. https://doi.org/10.1007/s00438-008-0405-7
RAYS III CL109, CL126, and CL158 - was found in four strong loci on the Y2 chromosome and three minor loci on the Y1 chromosome. https://doi.org/10.1093/gbe/evt049
RAYS III https://doi.org/10.1007/s00438-008-0405-7
rDNA The unexpected difference in proportion of rDNA in male (0.18%) and female (0.21%) was probably caused by higher sensitivity of GC-rich sequences (such as rDNA) https://doi.org/10.1093/gbe/evt049

Sex-chrom database 2021-2022