Rumex acetosa
Transposable elements
There are 2 pages with 15 entries
Name | Description | Protein homology | Other info | Source |
---|---|---|---|---|
Athila | Athila (CL41) was absent on the X chromosome. | https://doi.org/10.1093/gbe/evt049 | ||
Bianca | Lineage of Ty1-copia. | https://doi.org/10.1093/gbe/evt049 | ||
CACTA | DNA transposon. Considerably smaller genome propor- tions. | https://doi.org/10.1093/gbe/evt049 | ||
Chromovirus-CRM | CL25 - gave specific centromeric signals on all chromosomes. CL42 - Y-accumulated CRM subfamily. | https://doi.org/10.1093/gbe/evt049 | ||
Chromovirus-Tekay/Del | CL22 and CL37, like Ty1-copia elements, were absent from both Y chromosomes. | https://doi.org/10.1093/gbe/evt049 | ||
Copia superfamily | Ty1 Copia. | https://doi.org/10.1093/gbe/evt049 | ||
DOP-47 | Repetitive DNA sequence isolated from the microdissection of sex chromosomes. A higher homology was found between DOP-47 and DOP-61 and Ty3-gypsy-like polyproteins of LTR retroelements. No homology was detected among the isolated R. acetosa retroelements at the DNA level. | https://doi.org/10.1139/G05-089 | ||
DOP-60 | Repetitive DNA sequence isolated from the microdissection of sex chromosomes. Homologous at the amino-acid level with reverse transcriptase of plant non-LTR retrotransposons,and Ty1-copia-like polyproteins of LTR retroelements, respectively. | https://doi.org/10.1139/G05-089 | ||
DOP-61 | Repetitive DNA sequence isolated from the microdissection of sex chromosomes. A higher homology was found between DOP-47 and DOP-61 and Ty3-gypsy-like polyproteins of LTR retroelements. No homology was detected among the isolated R. acetosa retroelements at the DNA level. | https://doi.org/10.1139/G05-089 | ||
DOP-8 | Repetitive DNA sequence isolated from the microdissection of sex chromosomes. Homologous at the amino-acid level with reverse transcriptase of plant non-LTR retrotransposons,and Ty1-copia-like polyproteins of LTR retroelements, respectively. | https://doi.org/10.1139/G05-089 |
Sex-chrom database 2021-2022